Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MSC_0925Conserved hypothetical transmembrane protein. (166 aa)    
Predicted Functional Partners:
MSC_0919
Conserved hypothetical transmembrane protein.
 
     0.920
MSC_0923
Conserved hypothetical transmembrane protein.
 
     0.902
MSC_0922
Hypothetical prolipoprotein.
 
     0.895
MSC_0924
Hypothetical prolipoprotein.
 
     0.888
abc-14
ABC transporter, ATP-binding component; Truncated.
  
  
 0.848
abc-3
ABC transporter, ATP-binding component (Na+?).
 
  
 0.813
MSC_0320
Conserved hypothetical transmembrane protein.
 
     0.789
MSC_0321
Hypothetical transmembrane protein.
 
     0.789
MSC_0322
Conserved hypothetical prolipoprotein (abc transporter?).
 
     0.776
MSC_0622
Conserved HYPOTHETICAL PROTEIN.
 
     0.771
Your Current Organism:
Mycoplasma mycoides
NCBI taxonomy Id: 272632
Other names: M. mycoides subsp. mycoides SC str. PG1, Mycoplasma mycoides subsp. mycoides SC str. PG1, Mycoplasma mycoides subsp. mycoides SC strain PG1
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.