Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
oppA-2Oligopeptide ABC transporter, substrate-binding component. (985 aa)    
Predicted Functional Partners:
oppB-2
Oligopeptide ABC transporter, permease component.
 
 0.998
oppF-2
Oligopeptide ABC transporter, ATP-binding component; Belongs to the ABC transporter superfamily.
 
 0.997
oppD-2
Oligopeptide ABC transporter, ATP-binding component; Belongs to the ABC transporter superfamily.
 
 
 0.995
oppC-2
Oligopeptide ABC transporter, permease component.
 
 
 0.994
oppF-4
Oligopeptide ABC transporter, ATP-binding component; Truncated; Belongs to the ABC transporter superfamily.
 
 0.967
MSC_0963
Conserved hypothetical protein.
 
     0.958
oppB
Oligopeptide ABC transporter, permease component.
  
 0.951
oppF
Oligopeptide ABC transporter, ATP-binding component; Belongs to the ABC transporter superfamily.
  
 0.931
oppC
Oligopeptide ABC transporter, permease component I.
  
 
 0.926
oppD
Oligopeptide ABC transporter, ATP-binding component; Belongs to the ABC transporter superfamily.
  
 
 0.911
Your Current Organism:
Mycoplasma mycoides
NCBI taxonomy Id: 272632
Other names: M. mycoides subsp. mycoides SC str. PG1, Mycoplasma mycoides subsp. mycoides SC str. PG1, Mycoplasma mycoides subsp. mycoides SC strain PG1
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