Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MYPE7410 | MYPE7420 | gene:10731864 | gene:10731865 | Conserved hypothetical protein. | Nitrogen fixation protein NifU. | 0.922 |
MYPE7410 | MYPE7430 | gene:10731864 | gene:10731866 | Conserved hypothetical protein. | Aminotransferase NifS. | 0.994 |
MYPE7410 | MYPE7440 | gene:10731864 | gene:10731867 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.862 |
MYPE7410 | MYPE7450 | gene:10731864 | gene:10731868 | Conserved hypothetical protein. | ABC transporter ATP-binding protein. | 0.999 |
MYPE7410 | MYPE7460 | gene:10731864 | gene:10731869 | Conserved hypothetical protein. | Predicted acetyltransferase (GNAT) family protein. | 0.454 |
MYPE7420 | MYPE7410 | gene:10731865 | gene:10731864 | Nitrogen fixation protein NifU. | Conserved hypothetical protein. | 0.922 |
MYPE7420 | MYPE7430 | gene:10731865 | gene:10731866 | Nitrogen fixation protein NifU. | Aminotransferase NifS. | 0.996 |
MYPE7420 | MYPE7440 | gene:10731865 | gene:10731867 | Nitrogen fixation protein NifU. | Conserved hypothetical protein. | 0.920 |
MYPE7420 | MYPE7450 | gene:10731865 | gene:10731868 | Nitrogen fixation protein NifU. | ABC transporter ATP-binding protein. | 0.952 |
MYPE7420 | MYPE7460 | gene:10731865 | gene:10731869 | Nitrogen fixation protein NifU. | Predicted acetyltransferase (GNAT) family protein. | 0.454 |
MYPE7430 | MYPE7410 | gene:10731866 | gene:10731864 | Aminotransferase NifS. | Conserved hypothetical protein. | 0.994 |
MYPE7430 | MYPE7420 | gene:10731866 | gene:10731865 | Aminotransferase NifS. | Nitrogen fixation protein NifU. | 0.996 |
MYPE7430 | MYPE7440 | gene:10731866 | gene:10731867 | Aminotransferase NifS. | Conserved hypothetical protein. | 0.935 |
MYPE7430 | MYPE7450 | gene:10731866 | gene:10731868 | Aminotransferase NifS. | ABC transporter ATP-binding protein. | 0.995 |
MYPE7430 | MYPE7460 | gene:10731866 | gene:10731869 | Aminotransferase NifS. | Predicted acetyltransferase (GNAT) family protein. | 0.454 |
MYPE7440 | MYPE7410 | gene:10731867 | gene:10731864 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.862 |
MYPE7440 | MYPE7420 | gene:10731867 | gene:10731865 | Conserved hypothetical protein. | Nitrogen fixation protein NifU. | 0.920 |
MYPE7440 | MYPE7430 | gene:10731867 | gene:10731866 | Conserved hypothetical protein. | Aminotransferase NifS. | 0.935 |
MYPE7440 | MYPE7450 | gene:10731867 | gene:10731868 | Conserved hypothetical protein. | ABC transporter ATP-binding protein. | 0.982 |
MYPE7440 | MYPE7460 | gene:10731867 | gene:10731869 | Conserved hypothetical protein. | Predicted acetyltransferase (GNAT) family protein. | 0.454 |
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