STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F11_orf122aConserved hypothetical protein; MPN403(new), 436(Himmelreich et al., 1996). (122 aa)    
Predicted Functional Partners:
lig
DNA ligase; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA.
      
 0.815
F11_orf346
Conserved hypothetical protein; MPN404(new), 435(Himmelreich et al., 1996).
  
    0.788
F11_orf197
Conserved hypothetical protein; MPN405(new), 434(Himmelreich et al., 1996).
       0.773
F11_orf84
Acyl carrier protein-like protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
       0.658
rpmA
Ribosomal protein L27; MPN327(new), 510(Himmelreich et al., 1996); Belongs to the bacterial ribosomal protein bL27 family.
      
 0.638
MPN_039
Conserved hypothetical protein; MPN039(new), 115(Himmelreich et al., 1996); see: MPN036; Belongs to the MG032/MG096/MG288 family.
      
 0.606
proS
Putative prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro).
       0.480
Your Current Organism:
Mycoplasma pneumoniae M129
NCBI taxonomy Id: 272634
Other names: M. pneumoniae M129, Mycoplasma pneumoniae ATCC 29342, Mycoplasma pneumoniae str. M129, Mycoplasma pneumoniae strain M129
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