STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A05_orf475Permease; MPN421(new), 419(Himmelreich et al., 1996); To E.coli YihN. (475 aa)    
Predicted Functional Partners:
glpQ
Glycerophosphoryl diester phosphodiesterase; MPN420(new), 420(Himmelreich et al., 1996); To glycerophosphoryl diester phosphodiesterases (EC 3.1.4.46).
  
  
 0.897
R02_orf469
Hypothetical protein; MPN077(new), 078(Himmelreich et al., 1996); see: MPN076.
 
   
 0.863
uhpT
Hypothetical protein; MPN076(new), 079(Himmelreich et al., 1996).
 
  
 0.840
MPN_418
Conserved hypothetical protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family.
  
    0.625
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
       0.624
A65_orf794
Conserved hypothetical protein; MPN284(new), 552(Himmelreich et al., 1996); see: MPN200.
     
 0.516
E07_orf301
Putative lipoprotein; MPN133(new), 022(Himmelreich et al., 1996).
      
 0.515
A05_orf129
Conserved hypothetical protein; MPN423(new), 417(Himmelreich et al., 1996).
  
    0.508
mnmA
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.
       0.503
fruA
Fructose-permease IIBC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This system is involved in fructose transport.
  
  
 0.500
Your Current Organism:
Mycoplasma pneumoniae M129
NCBI taxonomy Id: 272634
Other names: M. pneumoniae M129, Mycoplasma pneumoniae ATCC 29342, Mycoplasma pneumoniae str. M129, Mycoplasma pneumoniae strain M129
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