| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| C12_orf172 | rpoA | MPN_626 | MPN_191 | Conserved hypothetical protein; MPN626(new), 216(Himmelreich et al., 1996). | RNA polymerase alpha core subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.885 |
| C12_orf172 | rpoB | MPN_626 | MPN_516 | Conserved hypothetical protein; MPN626(new), 216(Himmelreich et al., 1996). | RNA polymerase beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.954 |
| C12_orf172 | rpoC | MPN_626 | MPN_515 | Conserved hypothetical protein; MPN626(new), 216(Himmelreich et al., 1996). | DNA-directed RNA polymerase beta' chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.973 |
| greA | nusA | MPN_401 | MPN_154 | Transcription elongation factor; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. | N-utilization substance protein A-like protein; Participates in both transcription termination and antitermination. | 0.413 |
| greA | nusG | MPN_401 | MPN_067 | Transcription elongation factor; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. | Transcription antitermination factor; Participates in transcription elongation, termination and antitermination. | 0.907 |
| greA | rpoA | MPN_401 | MPN_191 | Transcription elongation factor; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. | RNA polymerase alpha core subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.992 |
| greA | rpoB | MPN_401 | MPN_516 | Transcription elongation factor; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. | RNA polymerase beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.998 |
| greA | rpoC | MPN_401 | MPN_515 | Transcription elongation factor; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. | DNA-directed RNA polymerase beta' chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.997 |
| greA | sigA | MPN_401 | MPN_352 | Transcription elongation factor; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. | Sigma-70 Factor Family; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.680 |
| nusA | greA | MPN_154 | MPN_401 | N-utilization substance protein A-like protein; Participates in both transcription termination and antitermination. | Transcription elongation factor; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. | 0.413 |
| nusA | nusG | MPN_154 | MPN_067 | N-utilization substance protein A-like protein; Participates in both transcription termination and antitermination. | Transcription antitermination factor; Participates in transcription elongation, termination and antitermination. | 0.914 |
| nusA | rplV | MPN_154 | MPN_170 | N-utilization substance protein A-like protein; Participates in both transcription termination and antitermination. | Ribosomal protein L22; This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g. L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (By similarity). | 0.896 |
| nusA | rpoA | MPN_154 | MPN_191 | N-utilization substance protein A-like protein; Participates in both transcription termination and antitermination. | RNA polymerase alpha core subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
| nusA | rpoB | MPN_154 | MPN_516 | N-utilization substance protein A-like protein; Participates in both transcription termination and antitermination. | RNA polymerase beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
| nusA | rpoC | MPN_154 | MPN_515 | N-utilization substance protein A-like protein; Participates in both transcription termination and antitermination. | DNA-directed RNA polymerase beta' chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.997 |
| nusA | rpsE | MPN_154 | MPN_182 | N-utilization substance protein A-like protein; Participates in both transcription termination and antitermination. | Ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family. | 0.908 |
| nusA | sigA | MPN_154 | MPN_352 | N-utilization substance protein A-like protein; Participates in both transcription termination and antitermination. | Sigma-70 Factor Family; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.724 |
| nusG | greA | MPN_067 | MPN_401 | Transcription antitermination factor; Participates in transcription elongation, termination and antitermination. | Transcription elongation factor; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. | 0.907 |
| nusG | nusA | MPN_067 | MPN_154 | Transcription antitermination factor; Participates in transcription elongation, termination and antitermination. | N-utilization substance protein A-like protein; Participates in both transcription termination and antitermination. | 0.914 |
| nusG | rplV | MPN_067 | MPN_170 | Transcription antitermination factor; Participates in transcription elongation, termination and antitermination. | Ribosomal protein L22; This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g. L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (By similarity). | 0.869 |
STRING v12.5 is now available!
