STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYPU_0340SERYL-TRNA SYNTHETASE (SERINE--TRNA LIGASE); Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec). (421 aa)    
Predicted Functional Partners:
MYPU_3580
ACYL CARRIER PROTEIN (ACP); Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 
 0.960
MYPU_0350
ESTERASE/LIPASE 1; Identified by sequence similarity; possible; similar to SWISS-PROT:P75333 (ESL1_MYCPN) Blastp2 P=2e-34 C=51%.
  
   0.810
MYPU_0360
ESTERASE/LIPASE 1; Identified by sequence similarity; possible; similar to SWISS-PROT:P75333 (ESL1_MYCPN) Blastp2 P=2e-26 C=47%.
  
   0.810
MYPU_0370
ESTERASE/LIPASE 1; Identified by sequence similarity; possible; similar to SWISS-PROT:P75333 (ESL1_MYCPN) Blastp2 P=4e-25 C=44%.
  
   0.810
MYPU_0380
ESTERASE/LIPASE 1; Identified by sequence similarity; possible; similar to SWISS-PROT:P75333 (ESL1_MYCPN) Blastp2 P=1e-27 C=45%.
  
   0.746
MYPU_0330
ESTERASE/LIPASE 2; Identified by sequence similarity; putative; similar to SWISS-PROT:Q49418 (ESL2_MYCGE) Blastp2 P=4e-09 C=37%.
  
   0.734
MYPU_0320
LIPOATE-PROTEIN LIGASE A; Identified by sequence similarity; possible; similar to SWISS-PROT:P75394 (LPLA_MYCPN) Blastp2 P=5e-67 C=58%.
       0.717
MYPU_0310
Unknown; No similarity found.
       0.711
MYPU_2430
ARGINYL-TRNA SYNTHETASE (ARGININE--TRNA LIGASE) (ARGRS); Identified by sequence similarity; possible; similar to SWISS-PROT:P46906 (SYR_BACSU) Blastp2 P=3e-97 C=52%; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.703
MYPU_2570
VALYL-TRNA SYNTHETASE (VALINE--TRNA LIGASE) (VALRS); Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.
  
  
 0.703
Your Current Organism:
Mycoplasma pulmonis
NCBI taxonomy Id: 272635
Other names: M. pulmonis UAB CTIP, Mycoplasma pulmonis UAB CTIP, Mycoplasma pulmonis str. UAB CTIP, Mycoplasma pulmonis strain UAB CTIP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.