STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYPU_4020LYSYL-TRNA SYNTHETASE (LYSINE--TRNA LIGASE) (LYSRS); Identified by sequence similarity; probable; similar to SWISS-PROT:Q49158 (SYK_MYCFE) Blastp2 P=0 C=73%; Belongs to the class-II aminoacyl-tRNA synthetase family. (491 aa)    
Predicted Functional Partners:
MYPU_6820
GLUTAMYL-TRNA SYNTHETASE (GLUTAMATE--TRNA LIGASE) (GLURS); Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.
  
 0.910
MYPU_3900
LYSYL-TRNA SYNTHETASE (LYSINE--TRNA LIGASE) (LYSRS); Identified by sequence similarity; probable; similar to SWISS-PROT:Q49158 (SYK_MYCFE) Blastp2 P=0 C=70%; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
  
 
0.900
MYPU_4900
METHIONYL-TRNA SYNTHETASE (METHIONINE--TRNA LIGASE) (METRS); Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2B subfamily.
  
 0.885
MYPU_6670
ISOLEUCYL-TRNA SYNTHETASE (ISOLEUCINE--TRNA LIGASE) (ILERS); Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily.
  
 0.835
MYPU_2430
ARGINYL-TRNA SYNTHETASE (ARGININE--TRNA LIGASE) (ARGRS); Identified by sequence similarity; possible; similar to SWISS-PROT:P46906 (SYR_BACSU) Blastp2 P=3e-97 C=52%; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.808
MYPU_1830
PROLYL-TRNA SYNTHETASE (PROLINE--TRNA LIGASE); Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro).
  
 0.794
MYPU_5330
30S RIBOSOMAL PROTEIN S2; Identified by sequence similarity; possible; similar to SWISS-PROT:P21464 (RS2_BACSU) Blastp2 P=1e-63 C=50%; Belongs to the universal ribosomal protein uS2 family.
  
 
 0.777
MYPU_0930
LEUCYL-TRNA SYNTHETASE (LEUCINE--TRNA LIGASE); Identified by sequence similarity; probable; similar to SWISS-PROT:P36430 (SYL_BACSU) Blastp2 P=0 C=70%; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.769
MYPU_3470
PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN (PHENYLALANINE--TRNA LIGASE BETA CHAIN) (PHERS); Identified by sequence similarity; possible; similar to SWISS-PROT:P75563 (SYFB_MYCPN) Blastp2 P=3e-43 C=46%; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
  
  
 0.755
MYPU_7710
ASPARAGINYL-TRNA SYNTHETASE (ASPARAGINE--TRNA LIGASE) (ASNRS); Identified by sequence similarity; probable; similar to SWISS-PROT:O51128 (SYN_BORBU) Blastp2 P=0 C=70%.
   
0.737
Your Current Organism:
Mycoplasma pulmonis
NCBI taxonomy Id: 272635
Other names: M. pulmonis UAB CTIP, Mycoplasma pulmonis UAB CTIP, Mycoplasma pulmonis str. UAB CTIP, Mycoplasma pulmonis strain UAB CTIP
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