STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYPU_5220Identified by sequence similarity; putative; similar to TREMBL:Q50274 Blastp2 P=3e-50 Id=46%; Pfscan : 18-28 PS00013 | PROKAR_LIPOPROTEIN Prokaryotic membrane lipoprotein lipid attachment site; Gene Rearrangements in the vsa Locus of Mycoplasma pulmonis; Xuejun Shen, Juliann Gumulak, Huilan Yu, C. Todd French, Nianxiang Zou, and Kevin Dybvig; J. Bacteriol. 2000; 182 2900-2908. (236 aa)    
Predicted Functional Partners:
MYPU_5210
Conserved hypothetical protein; Identified by sequence similarity; unknown; similar to TREMBL:Q50274 (Q50274) Blastp2 P=7e-09 C=7%; Gene Rearrangements in the vsa Locus of Mycoplasma pulmonis; Xuejun Shen, Juliann Gumulak, Huilan Yu, C. Todd French, Nianxiang Zou, and Kevin Dybvig; J. Bacteriol. 2000; 182 2900-2908.
       0.773
MYPU_5230
LIPOPROTEIN VSAA (FRAGMENT); Identified by sequence similarity, similar to trEMBL:Q50279 blastp2 P=0.67 score=35; Gene Rearrangements in the vsa Locus of Mycoplasma pulmonis; Xuejun Shen, Juliann Gumulak, Huilan Yu, C. Todd French, Nianxiang Zou, and Kevin Dybvig; J. Bacteriol. 2000; 182 2900-2908.
       0.453
Your Current Organism:
Mycoplasma pulmonis
NCBI taxonomy Id: 272635
Other names: M. pulmonis UAB CTIP, Mycoplasma pulmonis UAB CTIP, Mycoplasma pulmonis str. UAB CTIP, Mycoplasma pulmonis strain UAB CTIP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.