STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYPU_0250LIPOPROTEIN; Identified by sequence similarity; possible; similar to SWISS-PROT:P47432 (Y186_MYCGE) Blastp2 P=1e-17 C=42% pfscan: pos.15-25 PS00013 | PROKAR_LIPOPROTEIN Prokaryotic membrane lipoprotein lipid attachment site. (256 aa)    
Predicted Functional Partners:
MYPU_0240
LIPOPROTEIN; Identified by sequence similarity; putative; similar to TREMBL:P75489 Blastp2 P=9e-60 score=232 Pfscan: pos.12-22 PS00013 | PROKAR_LIPOPROTEIN Prokaryotic membrane lipoprotein lipid attachment site.
 
  
 0.968
MYPU_0270
ABC TRANSPORTER PERMEASE PROTEIN; Identified by sequence similarity; probable; similar to SWISS-PROT:P75263 (Y188_MYCPN) Blastp2 P=2e-77 C=57% Pfscan: pos. 220-299 PF00528 | BPD_TRANSP Binding-protein-dependent transport systems inner membrane component (PDOC pos. 210-268 GC0426 | BPD_TRANSP_INN_MEMBR Binding-protein-dependent transport systems inne.
 
   
 0.954
MYPU_0260
ABC TRANSPORTER ATP-BINDING PROTEIN; Identified by sequence similarity; probable; similar to SWISS-PROT:P47433 (Y187_MYCGE) Blastp2 P=0 C=61% Pfscan: pos. 60-85 PS50101 | ATP_GTP_A2 P-loop nucleotide binding motif (does not find all). pos. 384-456 PS50100 | DA_BOX 2nd half motif for nucleotide binding, associated with P-loop. pos. 58-460 PF00005 | ABC_TRAN ABC transporter (PDOC00185) pos. 362-415 GC0425 | ATP_BIND_TRANSPORT ATP-binding proteins `active transport' family pos. 65-72 PS00017 | ATP_GTP_A ATP/GTP-binding site motif A (P-loop) pos. 384-398 PS00211 | ABC_TRANSPORTER ABC trans [...]
 
   
 0.948
MYPU_0280
ABC TRANSPORTER PERMEASE PROTEIN; Identified by sequence similarity; probable; similar to SWISS-PROT:P75262 (Y189_MYCPN) Blastp2 P=2e-78 C=64% Pfscan: pos. 202-277 PF00528 | BPD_TRANSP Binding-protein-dependent transport systems inner membrane component (PDOC pos. 194-251 GC0426 | BPD_TRANSP_INN_MEMBR Binding-protein-dependent transport systems inne pos. 203-231 PS00402 | BPD_TRANSP_INN_MEMBR Binding-protein-dependent transport systems inner membrane comp. sign.
 
   
 0.942
MYPU_0290
Unknown; No similarity found.
       0.773
MYPU_5520
DEOXYGUANOSINE KINASE (DGUO KINASE) (DGK) (DEOXYNUCLEOSIDE KINASE COMPLEX I F-COMPONENT); Identified by sequence similarity; possible; similar to SWISS-PROT:P75396 (Y268_MYCPN) Blastp2 P=9e-21 C=50% Pfscan: pos. 7-14 PS00017 | ATP_GTP_A ATP/GTP-binding site motif A (P-loop).
 
    0.753
MYPU_0120
Unknown; No similarity found.
  
     0.745
MYPU_6940
MEMBRANE NUCLEASE; Identified by sequence similarity; possible; similar to TREMBL:Q50321 (Q50321) Blastp2 P=2e-53 C=43%.
 
     0.739
MYPU_2250
P37-LIKE (Mycoplasma hyorhinis) ABC TRANSPORTER SUBSTRATE-BINDING LIPOPROTEIN; Part of a high-affinity transport system.
  
     0.712
MYPU_0060
Unknown; No similarity found.
  
     0.710
Your Current Organism:
Mycoplasma pulmonis
NCBI taxonomy Id: 272635
Other names: M. pulmonis UAB CTIP, Mycoplasma pulmonis UAB CTIP, Mycoplasma pulmonis str. UAB CTIP, Mycoplasma pulmonis strain UAB CTIP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.