STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYPU_0480Unknown; No similarity found. (312 aa)    
Predicted Functional Partners:
MYPU_0490
DNA POLYMERASE III SUBUNIT GAMMA AND TAU; Identified by sequence similarity; putative; similar to SWISS-PROT:P09122 (DP3X_BACSU) Blastp2 P=1e-71 C=26%.
       0.581
MYPU_0500
Conserved hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.
       0.574
MYPU_0520
THYMIDYLATE KINASE (DTMP KINASE); Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
       0.563
MYPU_0510
RECOMBINATION PROTEIN RECR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.
       0.559
MYPU_0530
DNA POLYMERASE III SUBUNITS GAMMA AND TAU; Identified by sequence similarity; possible; similar to TREMBL:Q9X493 (Q9X493) Blastp2 P=3e-44 C=54%.
       0.534
MYPU_0540
Conserved hypothetical protein; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
       0.509
MYPU_0460
GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE; Identified by sequence similarity; probable; similar to SWISS-PROT:P75358 (G3P_MYCPN) Blastp2 P=0 C=69%; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
       0.501
MYPU_0450
METHIONYL-TRNA FORMYLTRANSFERASE; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
       0.445
Your Current Organism:
Mycoplasma pulmonis
NCBI taxonomy Id: 272635
Other names: M. pulmonis UAB CTIP, Mycoplasma pulmonis UAB CTIP, Mycoplasma pulmonis str. UAB CTIP, Mycoplasma pulmonis strain UAB CTIP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.