STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYPU_0920LIPOPROTEIN; No similarity found; Pfscan: pos. 15-25 PS00013 | PROKAR_LIPOPROTEIN Prokaryotic membrane lipoprotein lipid attachment site. (604 aa)    
Predicted Functional Partners:
MYPU_0910
Unknown; No similarity found.
       0.554
MYPU_0870
DNA-BINDING PROTEIN HU; Identified by sequence similarity; possible; similar to SWISS-PROT:P36206 (DBH_THEMA) Blastp2 P=8e-13 C=45%; Belongs to the bacterial histone-like protein family.
       0.418
MYPU_0880
GTP-BINDING PROTEIN; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.
       0.418
MYPU_0890
CYTIDYLATE KINASE (CK) (CYTIDINE MONOPHOSPHATE KINASE) (CMP KINASE); Identified by sequence similarity; possible; similar to SWISS-PROT:P38493 (KCY_BACSU) Blastp2 P=8e-30 C=58%.
       0.418
MYPU_0900
Unknown; No similarity found.
       0.418
Your Current Organism:
Mycoplasma pulmonis
NCBI taxonomy Id: 272635
Other names: M. pulmonis UAB CTIP, Mycoplasma pulmonis UAB CTIP, Mycoplasma pulmonis str. UAB CTIP, Mycoplasma pulmonis strain UAB CTIP
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