STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYPU_1440POTASSIUM UPTAKE PROTEIN KTRB; Identified by sequence similarity; possible; similar to TREMBL:O67474 Blastp2 P=1e-19 score=131 Pfscan: pos. 154-161 PS00017 | ATP_GTP_A ATP/GTP-binding site motif A (P-loop). (523 aa)    
Predicted Functional Partners:
MYPU_1370
POTASSIUM UPTAKE PROTEIN KTRA; Identified by sequence similarity; similar to TrEMBL:O87952 Blastp2 P=1e-19 score=97 Pfscan: pos. 1-78 PS00430 | TONB_DEPENDENT_REC_1 TonB-dependent receptor proteins signature 1.
 
 
 0.989
MYPU_4210
POTASSIUM CHANNEL PROTEIN; Identified by sequence similarity; putative; similar to SWISS-PROT:P56696 (CIQ4_HUMAN) Blastp2 P=3e-06 C=16% Pfscan: pos. 45-285 PS50266 | CATION_CHANNEL_TM Cation channels, 6TM region (non-ligand gated) pos. 228-285 PS50265 | CHANNEL_PORE_K Pore region of potassium channels. pos. 46-281 PF00520 | ION_TRANS Ion transport protein pos. 149-333 PF00914 | CNG_MEMBRANE Transmembrane region cyclic Nucleotide Gated Channel (PDOC00691).
  
 
 0.912
MYPU_1450
THYMIDINE KINASE; Identified by sequence similarity; possible; similar to SWISS-PROT:Q03221 (KITH_BACSU) Blastp2 P=2e-35 C=58%.
       0.603
MYPU_1460
Conserved hypothetical protein; Identified by sequence similarity; putative; similar to SWISS-PROT:Q49310 (Y33A_MYCGE) Blastp2 P=1e-08 C=62%.
       0.417
Your Current Organism:
Mycoplasma pulmonis
NCBI taxonomy Id: 272635
Other names: M. pulmonis UAB CTIP, Mycoplasma pulmonis UAB CTIP, Mycoplasma pulmonis str. UAB CTIP, Mycoplasma pulmonis strain UAB CTIP
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