Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MYPU_2410 | MYPU_2420 | gene:17576829 | gene:17576830 | Unknown; No similarity found. | Unknown; No similarity found. | 0.581 |
MYPU_2410 | MYPU_2430 | gene:17576829 | gene:17576831 | Unknown; No similarity found. | ARGINYL-TRNA SYNTHETASE (ARGININE--TRNA LIGASE) (ARGRS); Identified by sequence similarity; possible; similar to SWISS-PROT:P46906 (SYR_BACSU) Blastp2 P=3e-97 C=52%; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.417 |
MYPU_2420 | MYPU_2410 | gene:17576830 | gene:17576829 | Unknown; No similarity found. | Unknown; No similarity found. | 0.581 |
MYPU_2420 | MYPU_2430 | gene:17576830 | gene:17576831 | Unknown; No similarity found. | ARGINYL-TRNA SYNTHETASE (ARGININE--TRNA LIGASE) (ARGRS); Identified by sequence similarity; possible; similar to SWISS-PROT:P46906 (SYR_BACSU) Blastp2 P=3e-97 C=52%; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.539 |
MYPU_2430 | MYPU_2410 | gene:17576831 | gene:17576829 | ARGINYL-TRNA SYNTHETASE (ARGININE--TRNA LIGASE) (ARGRS); Identified by sequence similarity; possible; similar to SWISS-PROT:P46906 (SYR_BACSU) Blastp2 P=3e-97 C=52%; Belongs to the class-I aminoacyl-tRNA synthetase family. | Unknown; No similarity found. | 0.417 |
MYPU_2430 | MYPU_2420 | gene:17576831 | gene:17576830 | ARGINYL-TRNA SYNTHETASE (ARGININE--TRNA LIGASE) (ARGRS); Identified by sequence similarity; possible; similar to SWISS-PROT:P46906 (SYR_BACSU) Blastp2 P=3e-97 C=52%; Belongs to the class-I aminoacyl-tRNA synthetase family. | Unknown; No similarity found. | 0.539 |