STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OOF33855.1Nitrate reductase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. (1257 aa)    
Predicted Functional Partners:
OOF33856.1
Nitrate reductase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
OOF33858.1
Respiratory nitrate reductase subunit gamma; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.999
OOF33857.1
Nitrate reductase molybdenum cofactor assembly chaperone; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.998
OOF33845.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.911
OOF33844.1
Antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.909
OOF33859.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.907
OOF33846.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.904
OOF33838.1
FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.893
CoxB
Cytochrome c oxidase subunit II; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.821
OOF34995.1
Cytochrome-c oxidase, cbb3-type subunit III; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.763
Your Current Organism:
Salinivibrio costicola
NCBI taxonomy Id: 272773
Other names: ATCC BAA-952, DSM 16359, S. costicola subsp. alcaliphilus, Salinivibrio costicola subsp. alcaliphilus, Salinivibrio costicola subsp. alcaliphilus Romano et al. 2005, Salinivibrio sp. 18AG, Salinivibrio sp. CBH448, strain 18AG
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.