STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BZJ21_11240Anaerobic ribonucleoside-triphosphate reductase activating protein; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology. (612 aa)    
Predicted Functional Partners:
OOF32968.1
Anaerobic ribonucleotide reductase-activating protein; Activates anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.746
NrdB
Ribonucleotide-diphosphate reductase subunit beta; B2 or R2 protein; type 1a enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.702
OOF33195.1
7-carboxy-7-deazaguanine synthase QueE; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.693
OOF35401.1
dCTP deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.665
NrdA
Ribonucleoside-diphosphate reductase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.598
PyrH
UMP kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.573
OOF35464.1
Adenylate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.536
OOF33951.1
Nucleoside-diphosphate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.527
OOF33502.1
3-phosphoshikimate 1-carboxyvinyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.491
Hpt
Hypoxanthine phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.481
Your Current Organism:
Salinivibrio costicola
NCBI taxonomy Id: 272773
Other names: ATCC BAA-952, DSM 16359, S. costicola subsp. alcaliphilus, Salinivibrio costicola subsp. alcaliphilus, Salinivibrio costicola subsp. alcaliphilus Romano et al. 2005, Salinivibrio sp. 18AG, Salinivibrio sp. CBH448, strain 18AG
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