Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PM0401 | PM0402 | PM0401 | PM0402 | Unknown; Part of a sulfur-relay system. | Unknown. | 0.578 |
PM0401 | PM0787 | PM0401 | PM0787 | Unknown; Part of a sulfur-relay system. | Unknown. | 0.424 |
PM0401 | PM1353 | PM0401 | PM1353 | Unknown; Part of a sulfur-relay system. | Unknown. | 0.629 |
PM0401 | mnmA | PM0401 | PM1336 | Unknown; Part of a sulfur-relay system. | Unknown; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34. | 0.932 |
PM0401 | tusC | PM0401 | PM1352 | Unknown; Part of a sulfur-relay system. | Unknown; Could be part of a sulfur-relay system; Belongs to the DsrF/TusC family. | 0.820 |
PM0401 | tusD | PM0401 | PM1351 | Unknown; Part of a sulfur-relay system. | Unknown; Could be part of a sulfur-relay system; Belongs to the DsrE/TusD family. | 0.983 |
PM0401 | yfeA | PM0401 | PM0400 | Unknown; Part of a sulfur-relay system. | YfeA; Belongs to the bacterial solute-binding protein 9 family. | 0.512 |
PM0401 | yfeB | PM0401 | PM0399 | Unknown; Part of a sulfur-relay system. | YfeB. | 0.512 |
PM0401 | yfeC | PM0401 | PM0398 | Unknown; Part of a sulfur-relay system. | YfeC. | 0.512 |
PM0401 | yfeD | PM0401 | PM0397 | Unknown; Part of a sulfur-relay system. | YfeD. | 0.512 |
PM0402 | PM0401 | PM0402 | PM0401 | Unknown. | Unknown; Part of a sulfur-relay system. | 0.578 |
PM0787 | PM0401 | PM0787 | PM0401 | Unknown. | Unknown; Part of a sulfur-relay system. | 0.424 |
PM1353 | PM0401 | PM1353 | PM0401 | Unknown. | Unknown; Part of a sulfur-relay system. | 0.629 |
PM1353 | mnmA | PM1353 | PM1336 | Unknown. | Unknown; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34. | 0.571 |
PM1353 | tusC | PM1353 | PM1352 | Unknown. | Unknown; Could be part of a sulfur-relay system; Belongs to the DsrF/TusC family. | 0.999 |
PM1353 | tusD | PM1353 | PM1351 | Unknown. | Unknown; Could be part of a sulfur-relay system; Belongs to the DsrE/TusD family. | 0.997 |
mnmA | PM0401 | PM1336 | PM0401 | Unknown; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34. | Unknown; Part of a sulfur-relay system. | 0.932 |
mnmA | PM1353 | PM1336 | PM1353 | Unknown; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34. | Unknown. | 0.571 |
mnmA | tusD | PM1336 | PM1351 | Unknown; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34. | Unknown; Could be part of a sulfur-relay system; Belongs to the DsrE/TusD family. | 0.547 |
tusC | PM0401 | PM1352 | PM0401 | Unknown; Could be part of a sulfur-relay system; Belongs to the DsrF/TusC family. | Unknown; Part of a sulfur-relay system. | 0.820 |
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