Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
hisIE | pheA | PM1206 | PM0150 | HisIE; In the C-terminal section; belongs to the PRA-PH family. | PheA. | 0.614 |
hisIE | trpA | PM1206 | PM0577 | HisIE; In the C-terminal section; belongs to the PRA-PH family. | TrpA; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.616 |
hisIE | trpB | PM1206 | PM0578 | HisIE; In the C-terminal section; belongs to the PRA-PH family. | TrpB; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.547 |
hisIE | trpC | PM1206 | PM0580 | HisIE; In the C-terminal section; belongs to the PRA-PH family. | TrpC; Bifunctional enzyme that catalyzes two sequential steps of tryptophan biosynthetic pathway. The first reaction is catalyzed by the isomerase, coded by the TrpF domain; the second reaction is catalyzed by the synthase, coded by the TrpC domain (By similarity). | 0.877 |
hisIE | trpD | PM1206 | PM0581 | HisIE; In the C-terminal section; belongs to the PRA-PH family. | TrpD; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | 0.605 |
menF | pheA | PM0053 | PM0150 | MenF; Catalyzes the conversion of chorismate to isochorismate. | PheA. | 0.917 |
menF | trpA | PM0053 | PM0577 | MenF; Catalyzes the conversion of chorismate to isochorismate. | TrpA; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.732 |
menF | trpB | PM0053 | PM0578 | MenF; Catalyzes the conversion of chorismate to isochorismate. | TrpB; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.698 |
menF | trpC | PM0053 | PM0580 | MenF; Catalyzes the conversion of chorismate to isochorismate. | TrpC; Bifunctional enzyme that catalyzes two sequential steps of tryptophan biosynthetic pathway. The first reaction is catalyzed by the isomerase, coded by the TrpF domain; the second reaction is catalyzed by the synthase, coded by the TrpC domain (By similarity). | 0.797 |
menF | trpD | PM0053 | PM0581 | MenF; Catalyzes the conversion of chorismate to isochorismate. | TrpD; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | 0.760 |
menF | trpE | PM0053 | PM0584 | MenF; Catalyzes the conversion of chorismate to isochorismate. | TrpE. | 0.865 |
menF | trpG_1 | PM0053 | PM0583 | MenF; Catalyzes the conversion of chorismate to isochorismate. | TrpG. | 0.952 |
menF | trpG_2 | PM0053 | PM1463 | MenF; Catalyzes the conversion of chorismate to isochorismate. | TrpG. | 0.755 |
pabB | pheA | PM1464 | PM0150 | PabB; To the C-terminal of para-aminobenzoate synthase component I. | PheA. | 0.902 |
pabB | trpA | PM1464 | PM0577 | PabB; To the C-terminal of para-aminobenzoate synthase component I. | TrpA; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.819 |
pabB | trpB | PM1464 | PM0578 | PabB; To the C-terminal of para-aminobenzoate synthase component I. | TrpB; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.813 |
pabB | trpC | PM1464 | PM0580 | PabB; To the C-terminal of para-aminobenzoate synthase component I. | TrpC; Bifunctional enzyme that catalyzes two sequential steps of tryptophan biosynthetic pathway. The first reaction is catalyzed by the isomerase, coded by the TrpF domain; the second reaction is catalyzed by the synthase, coded by the TrpC domain (By similarity). | 0.988 |
pabB | trpD | PM1464 | PM0581 | PabB; To the C-terminal of para-aminobenzoate synthase component I. | TrpD; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | 0.970 |
pabB | trpE | PM1464 | PM0584 | PabB; To the C-terminal of para-aminobenzoate synthase component I. | TrpE. | 0.856 |
pabB | trpG_1 | PM1464 | PM0583 | PabB; To the C-terminal of para-aminobenzoate synthase component I. | TrpG. | 0.997 |
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