STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PM0678Unknown. (523 aa)    
Predicted Functional Partners:
oppB
OppB.
 
  
 0.835
oppC
OppC.
 
  
 0.809
oppD
OppD; Belongs to the ABC transporter superfamily.
 
  
 0.756
oppF
OppF; Belongs to the ABC transporter superfamily.
 
  
 0.746
dppB
DppB.
 
  
 0.654
PM0679
Unknown.
       0.606
dppC
DppC.
 
  
 0.595
sapA
SapA.
  
  
  0.594
dppF
DppF; Belongs to the ABC transporter superfamily.
 
  
 0.567
hbpA
HbpA.
 
 
 0.566
Your Current Organism:
Pasteurella multocida Pm70
NCBI taxonomy Id: 272843
Other names: P. multocida subsp. multocida str. Pm70, Pasteurella multocida subsp. multocida Pm70, Pasteurella multocida subsp. multocida str. Pm70, Pasteurella multocida subsp. multocida strain Pm70
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.