Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PM0776 | PM0777 | PM0776 | PM0777 | Unknown. | Unknown. | 0.839 |
PM0776 | fcbD | PM0776 | PM0775 | Unknown. | Unknown; Glycosyltransferase that catalyzes elongation of chondroitin, a polysaccharide composed of a repeating disaccharide of N- acetylgalactosamine (GalNAc) and glucuronic acid (GlcUA) units, by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. Each chondroitin unit has the composition beta-(1->4)-GlcUA-beta-(1->3)- GalNAc. | 0.804 |
PM0776 | galE | PM0776 | PM0286 | Unknown. | GalE; Involved in the metabolism of galactose. Catalyzes the conversion of UDP-galactose (UDP-Gal) to UDP-glucose (UDP-Glc) through a mechanism involving the transient reduction of NAD (By similarity). | 0.931 |
PM0776 | galT | PM0776 | PM1036 | Unknown. | GalT. | 0.810 |
PM0776 | galU | PM0776 | PM1289 | Unknown. | GalU. | 0.974 |
PM0776 | hexA | PM0776 | PM0781 | Unknown. | HexA. | 0.769 |
PM0776 | hexB | PM0776 | PM0780 | Unknown. | HexB. | 0.750 |
PM0776 | hexD | PM0776 | PM0778 | Unknown. | HexD. | 0.761 |
PM0776 | rffG | PM0776 | PM1030 | Unknown. | RffG; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. | 0.786 |
PM0776 | wbjC | PM0776 | PM1008 | Unknown. | WbjC. | 0.960 |
PM0777 | PM0776 | PM0777 | PM0776 | Unknown. | Unknown. | 0.839 |
PM0777 | fcbD | PM0777 | PM0775 | Unknown. | Unknown; Glycosyltransferase that catalyzes elongation of chondroitin, a polysaccharide composed of a repeating disaccharide of N- acetylgalactosamine (GalNAc) and glucuronic acid (GlcUA) units, by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. Each chondroitin unit has the composition beta-(1->4)-GlcUA-beta-(1->3)- GalNAc. | 0.713 |
PM0777 | hexA | PM0777 | PM0781 | Unknown. | HexA. | 0.822 |
PM0777 | hexB | PM0777 | PM0780 | Unknown. | HexB. | 0.765 |
PM0777 | hexD | PM0777 | PM0778 | Unknown. | HexD. | 0.782 |
fcbD | PM0776 | PM0775 | PM0776 | Unknown; Glycosyltransferase that catalyzes elongation of chondroitin, a polysaccharide composed of a repeating disaccharide of N- acetylgalactosamine (GalNAc) and glucuronic acid (GlcUA) units, by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. Each chondroitin unit has the composition beta-(1->4)-GlcUA-beta-(1->3)- GalNAc. | Unknown. | 0.804 |
fcbD | PM0777 | PM0775 | PM0777 | Unknown; Glycosyltransferase that catalyzes elongation of chondroitin, a polysaccharide composed of a repeating disaccharide of N- acetylgalactosamine (GalNAc) and glucuronic acid (GlcUA) units, by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. Each chondroitin unit has the composition beta-(1->4)-GlcUA-beta-(1->3)- GalNAc. | Unknown. | 0.713 |
fcbD | galE | PM0775 | PM0286 | Unknown; Glycosyltransferase that catalyzes elongation of chondroitin, a polysaccharide composed of a repeating disaccharide of N- acetylgalactosamine (GalNAc) and glucuronic acid (GlcUA) units, by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. Each chondroitin unit has the composition beta-(1->4)-GlcUA-beta-(1->3)- GalNAc. | GalE; Involved in the metabolism of galactose. Catalyzes the conversion of UDP-galactose (UDP-Gal) to UDP-glucose (UDP-Glc) through a mechanism involving the transient reduction of NAD (By similarity). | 0.507 |
fcbD | galU | PM0775 | PM1289 | Unknown; Glycosyltransferase that catalyzes elongation of chondroitin, a polysaccharide composed of a repeating disaccharide of N- acetylgalactosamine (GalNAc) and glucuronic acid (GlcUA) units, by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. Each chondroitin unit has the composition beta-(1->4)-GlcUA-beta-(1->3)- GalNAc. | GalU. | 0.434 |
fcbD | hexA | PM0775 | PM0781 | Unknown; Glycosyltransferase that catalyzes elongation of chondroitin, a polysaccharide composed of a repeating disaccharide of N- acetylgalactosamine (GalNAc) and glucuronic acid (GlcUA) units, by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. Each chondroitin unit has the composition beta-(1->4)-GlcUA-beta-(1->3)- GalNAc. | HexA. | 0.848 |
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