Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PM0950 | dcd | PM0950 | PM0951 | Unknown. | Dcd; Catalyzes the deamination of dCTP to dUTP. | 0.793 |
PM0950 | sotB | PM0950 | PM0949 | Unknown. | Unknown; Involved in the efflux of sugars. The physiological role may be the reduction of the intracellular concentration of toxic sugars or sugar metabolites; Belongs to the major facilitator superfamily. SotB (TC 2.A.1.2) family. | 0.784 |
PM0950 | udk | PM0950 | PM0952 | Unknown. | Udk. | 0.760 |
dcd | PM0950 | PM0951 | PM0950 | Dcd; Catalyzes the deamination of dCTP to dUTP. | Unknown. | 0.793 |
dcd | dut | PM0951 | PM1154 | Dcd; Catalyzes the deamination of dCTP to dUTP. | Dut; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family. | 0.921 |
dcd | mazG | PM0951 | PM1285 | Dcd; Catalyzes the deamination of dCTP to dUTP. | MazG. | 0.913 |
dcd | metJ | PM0951 | PM1290 | Dcd; Catalyzes the deamination of dCTP to dUTP. | MetJ; This regulatory protein, when combined with SAM (S- adenosylmethionine) represses the expression of the methionine regulon and of enzymes involved in SAM synthesis; Belongs to the MetJ family. | 0.448 |
dcd | ndk | PM0951 | PM1028 | Dcd; Catalyzes the deamination of dCTP to dUTP. | Ndk; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.919 |
dcd | nrdA | PM0951 | PM0717 | Dcd; Catalyzes the deamination of dCTP to dUTP. | NrdA; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | 0.537 |
dcd | nrdD | PM0951 | PM0940 | Dcd; Catalyzes the deamination of dCTP to dUTP. | NrdD. | 0.901 |
dcd | pyrG | PM0951 | PM1872 | Dcd; Catalyzes the deamination of dCTP to dUTP. | PyrG; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates. | 0.914 |
dcd | sotB | PM0951 | PM0949 | Dcd; Catalyzes the deamination of dCTP to dUTP. | Unknown; Involved in the efflux of sugars. The physiological role may be the reduction of the intracellular concentration of toxic sugars or sugar metabolites; Belongs to the major facilitator superfamily. SotB (TC 2.A.1.2) family. | 0.785 |
dcd | udk | PM0951 | PM0952 | Dcd; Catalyzes the deamination of dCTP to dUTP. | Udk. | 0.761 |
dut | dcd | PM1154 | PM0951 | Dut; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family. | Dcd; Catalyzes the deamination of dCTP to dUTP. | 0.921 |
dut | ndk | PM1154 | PM1028 | Dut; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family. | Ndk; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.927 |
dut | nrdA | PM1154 | PM0717 | Dut; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family. | NrdA; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | 0.712 |
dut | nrdD | PM1154 | PM0940 | Dut; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family. | NrdD. | 0.920 |
mazG | dcd | PM1285 | PM0951 | MazG. | Dcd; Catalyzes the deamination of dCTP to dUTP. | 0.913 |
mazG | ndk | PM1285 | PM1028 | MazG. | Ndk; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.900 |
mazG | nrdD | PM1285 | PM0940 | MazG. | NrdD. | 0.900 |
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