STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hpaIHpaI; Belongs to the HpcH/HpaI aldolase family. (266 aa)    
Predicted Functional Partners:
hpaH
HpaH.
 
 0.999
attK
AttK; Belongs to the aldehyde dehydrogenase family.
  
 
 0.977
hpaF
HpaF.
 
  
 0.944
hpaD
HpaD.
 
  
 0.927
hpaA
HpaA.
 
  
 0.678
bcr_2
Bcr.
  
    0.671
hpaG_1
HpaG.
 
  
 0.605
hpaG_2
HpaG.
 
  
 0.582
PM1523
Unknown.
 
  
 0.489
hsdM
HsdM.
       0.470
Your Current Organism:
Pasteurella multocida Pm70
NCBI taxonomy Id: 272843
Other names: P. multocida subsp. multocida str. Pm70, Pasteurella multocida subsp. multocida Pm70, Pasteurella multocida subsp. multocida str. Pm70, Pasteurella multocida subsp. multocida strain Pm70
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.