Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| PAB0019 | PABs13722 | PAB0019 | PABs13722 | Hypothetical protein. | Predicted Zn-ribbon RNA-binding protein involved in translation. | 0.572 |
| PAB0019 | ef1b | PAB0019 | PAB3009 | Hypothetical protein. | EF-1 beta translation elongation factor EF-1, subunit beta; Promotes the exchange of GDP for GTP in EF-1-alpha/GDP, thus allowing the regeneration of EF-1-alpha/GTP that could then be used to form the ternary complex EF-1-alpha/GTP/AAtRNA. | 0.572 |
| PAB0019 | putP-3 | PAB0019 | PAB2354 | Hypothetical protein. | Proline or pantothenate permease; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.424 |
| PAB0019 | ubiA-like | PAB0019 | PAB0018 | Hypothetical protein. | ubiA-like 4-hydroxybenzoate octaprenyltransferase, probable; Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C2 hydroxyl of (S)-3-O-geranylgeranylglyceryl phosphate (GGGP). This reaction is the second ether-bond-formation step in the biosynthesis of archaeal membrane lipids. | 0.793 |
| PABs13722 | PAB0019 | PABs13722 | PAB0019 | Predicted Zn-ribbon RNA-binding protein involved in translation. | Hypothetical protein. | 0.572 |
| PABs13722 | ef1b | PABs13722 | PAB3009 | Predicted Zn-ribbon RNA-binding protein involved in translation. | EF-1 beta translation elongation factor EF-1, subunit beta; Promotes the exchange of GDP for GTP in EF-1-alpha/GDP, thus allowing the regeneration of EF-1-alpha/GTP that could then be used to form the ternary complex EF-1-alpha/GTP/AAtRNA. | 0.981 |
| PABs13722 | ubiA-like | PABs13722 | PAB0018 | Predicted Zn-ribbon RNA-binding protein involved in translation. | ubiA-like 4-hydroxybenzoate octaprenyltransferase, probable; Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C2 hydroxyl of (S)-3-O-geranylgeranylglyceryl phosphate (GGGP). This reaction is the second ether-bond-formation step in the biosynthesis of archaeal membrane lipids. | 0.575 |
| ef1b | PAB0019 | PAB3009 | PAB0019 | EF-1 beta translation elongation factor EF-1, subunit beta; Promotes the exchange of GDP for GTP in EF-1-alpha/GDP, thus allowing the regeneration of EF-1-alpha/GTP that could then be used to form the ternary complex EF-1-alpha/GTP/AAtRNA. | Hypothetical protein. | 0.572 |
| ef1b | PABs13722 | PAB3009 | PABs13722 | EF-1 beta translation elongation factor EF-1, subunit beta; Promotes the exchange of GDP for GTP in EF-1-alpha/GDP, thus allowing the regeneration of EF-1-alpha/GTP that could then be used to form the ternary complex EF-1-alpha/GTP/AAtRNA. | Predicted Zn-ribbon RNA-binding protein involved in translation. | 0.981 |
| ef1b | ubiA-like | PAB3009 | PAB0018 | EF-1 beta translation elongation factor EF-1, subunit beta; Promotes the exchange of GDP for GTP in EF-1-alpha/GDP, thus allowing the regeneration of EF-1-alpha/GTP that could then be used to form the ternary complex EF-1-alpha/GTP/AAtRNA. | ubiA-like 4-hydroxybenzoate octaprenyltransferase, probable; Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C2 hydroxyl of (S)-3-O-geranylgeranylglyceryl phosphate (GGGP). This reaction is the second ether-bond-formation step in the biosynthesis of archaeal membrane lipids. | 0.574 |
| putP-3 | PAB0019 | PAB2354 | PAB0019 | Proline or pantothenate permease; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | Hypothetical protein. | 0.424 |
| putP-3 | ubiA-like | PAB2354 | PAB0018 | Proline or pantothenate permease; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | ubiA-like 4-hydroxybenzoate octaprenyltransferase, probable; Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C2 hydroxyl of (S)-3-O-geranylgeranylglyceryl phosphate (GGGP). This reaction is the second ether-bond-formation step in the biosynthesis of archaeal membrane lipids. | 0.424 |
| ubiA-like | PAB0019 | PAB0018 | PAB0019 | ubiA-like 4-hydroxybenzoate octaprenyltransferase, probable; Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C2 hydroxyl of (S)-3-O-geranylgeranylglyceryl phosphate (GGGP). This reaction is the second ether-bond-formation step in the biosynthesis of archaeal membrane lipids. | Hypothetical protein. | 0.793 |
| ubiA-like | PABs13722 | PAB0018 | PABs13722 | ubiA-like 4-hydroxybenzoate octaprenyltransferase, probable; Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C2 hydroxyl of (S)-3-O-geranylgeranylglyceryl phosphate (GGGP). This reaction is the second ether-bond-formation step in the biosynthesis of archaeal membrane lipids. | Predicted Zn-ribbon RNA-binding protein involved in translation. | 0.575 |
| ubiA-like | ef1b | PAB0018 | PAB3009 | ubiA-like 4-hydroxybenzoate octaprenyltransferase, probable; Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C2 hydroxyl of (S)-3-O-geranylgeranylglyceryl phosphate (GGGP). This reaction is the second ether-bond-formation step in the biosynthesis of archaeal membrane lipids. | EF-1 beta translation elongation factor EF-1, subunit beta; Promotes the exchange of GDP for GTP in EF-1-alpha/GDP, thus allowing the regeneration of EF-1-alpha/GTP that could then be used to form the ternary complex EF-1-alpha/GTP/AAtRNA. | 0.574 |
| ubiA-like | putP-3 | PAB0018 | PAB2354 | ubiA-like 4-hydroxybenzoate octaprenyltransferase, probable; Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C2 hydroxyl of (S)-3-O-geranylgeranylglyceryl phosphate (GGGP). This reaction is the second ether-bond-formation step in the biosynthesis of archaeal membrane lipids. | Proline or pantothenate permease; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.424 |