Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PAB0108Predicted transcriptional regulator. (240 aa)    
Predicted Functional Partners:
bchP
Geranylgeranyl hydrogenase; Is involved in the reduction of 2,3- digeranylgeranylglycerophospholipids (unsaturated archaeols) into 2,3- diphytanylglycerophospholipids (saturated archaeols) in the biosynthesis of archaeal membrane lipids. Catalyzes the formation of archaetidic acid (2,3-di-O-phytanyl-sn-glyceryl phosphate) from 2,3-di- O-geranylgeranylglyceryl phosphate (DGGGP) via the hydrogenation of each double bond of the isoprenoid chains.
     
 0.934
PAB3048
Putative ferredoxin.
     
 0.934
PAB2245
Glutaredoxin-like protein.
     
 0.915
PAB1252
Fragment pyrolysin related.
  
     0.701
PAB0993
Hypothetical protein.
  
     0.672
PAB0082
Queuine tRNA-ribosyltransferase.
  
     0.655
PAB0206
Hypothetical protein.
  
     0.650
PAB2202
Oligosaccharyl transferase, STT3 subunit.
  
     0.641
PAB0056
Glycosyl transferase, family 39.
  
     0.623
PAB0974
Oligosaccharyl transferase, STT3 subunit.
  
     0.615
Your Current Organism:
Pyrococcus abyssi
NCBI taxonomy Id: 272844
Other names: P. abyssi GE5, Pyrococcus abyssi GE5, Pyrococcus abyssi str. GE5, Pyrococcus abyssi str. Orsay, Pyrococcus abyssi strain GE5
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