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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAB0249ABC ABC-type transport system, ATPase component, substrate unknown; Probably part of an ABC transporter complex. Responsible for energy coupling to the transport system (By similarity). (280 aa)    
Predicted Functional Partners:
PAB2261
Cobalt transport protein, cbiQ family.
 
 0.993
PAB2248
bioY biotin biosynthesis protein.
 
 
 0.955
trkH
trkG/H trk potassium uptake system protein.
  
  
 0.863
PAB2260
ABC transporter, ATP-binding protein, substrate unknown; Probably part of an ABC transporter complex. Responsible for energy coupling to the transport system (By similarity).
  
 
 
0.842
PAB2090
Hypothetical protein.
 
 
 
 0.703
tiaS
Predicted DNA-binding protein; ATP-dependent agmatine transferase that catalyzes the formation of 2-agmatinylcytidine (agm2C) at the wobble position (C34) of tRNA(Ile2), converting the codon specificity from AUG to AUA.
       0.641
truA
truA pseudouridylate synthase I; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs; Belongs to the tRNA pseudouridine synthase TruA family.
  
  
 0.628
PAB0250
cysM cysteine synthase (EC 4.2.99.8).
     
 0.561
moaC
moaC molybdenum cofactor biosynthesis protein; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.
     
 0.550
PAB1819
Squalene-hopene cyclase, putative.
   
    0.516
Your Current Organism:
Pyrococcus abyssi
NCBI taxonomy Id: 272844
Other names: P. abyssi GE5, Pyrococcus abyssi GE5, Pyrococcus abyssi str. GE5, Pyrococcus abyssi str. Orsay, Pyrococcus abyssi strain GE5
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