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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAB0279Protein tyrosine/serine/threonine phosphatase. (151 aa)    
Predicted Functional Partners:
rpl40E
rpl40E LSU ribosomal protein L40E; Belongs to the eukaryotic ribosomal protein eL40 family.
   
  0.703
PAB0405
Predicted serine/threonine protein kinase, rio1 family.
  
 
 0.674
PAB0955
ATP(GTP)binding protein; Small GTPase that may be involved in genome maintenance. Has weak intrinsic GTPase activity but displays no ATPase activity. Belongs to the GPN-loop GTPase family.
  
 0.662
PAB1065
Hypothetical protein, possibly GTP-binding.
  
 0.639
PAB1013
Predicted serine/threonine protein kinase, RIO-like.
  
  
 0.618
nob1
Conserved hypothetical protein; Toxic component of a type II toxin-antitoxin (TA) system. Processes pre-16S-rRNA at its 3' end (the D-site) to yield the mature 3' end (By similarity); Belongs to the PINc/VapC protein family.
   
  
 0.605
pgsA-like
Putative CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
 
 0.604
eif-6
Ribosome anti-association factor eIF6 homolog; Binds to the 50S ribosomal subunit and prevents its association with the 30S ribosomal subunit to form the 70S initiation complex.
  
 
 0.598
PAB1050
Lysophospholipase, putative.
 
  
 0.580
PAB1716
Hypothetical protein.
   
 
 0.576
Your Current Organism:
Pyrococcus abyssi
NCBI taxonomy Id: 272844
Other names: P. abyssi GE5, Pyrococcus abyssi GE5, Pyrococcus abyssi str. GE5, Pyrococcus abyssi str. Orsay, Pyrococcus abyssi strain GE5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.