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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
korDkorD 2-ketoglutarate ferredoxin oxidoreductase, subunit delta. (101 aa)    
Predicted Functional Partners:
korG-1
korG-1 2-ketoglutarate ferredoxin oxidoreductase, subunit gamma.
 
 
 0.995
korG-2
korG-2 2-ketoglutarate ferredoxin oxidoreductase, subunit gamma.
 
 
 0.995
korA-2
korA-2 2-ketoglutarate ferredoxin oxidoreductase, subunit alpha.
 
 
 0.992
korA-1
korA-1 2-ketoglutarate ferredoxin oxidoreductase, subunit alpha.
 
 
 0.991
korB-1
korB-1 2-ketoglutarate ferredoxin oxidoreductase, subunit beta.
 
 
 0.990
korB-2
korB-2 2-ketoglutarate ferredoxin oxidoreductase, subunit beta.
 
 
 0.990
mcmA1
mcmA1 methylmalonyl-coA mutase, subunit alpha.
     
 0.902
PAB2187
Methylmalonyl coA mutase, beta chain.
     
 0.902
leuB-2
leuB-2 3-isopropylmalate dehydrogenase.
    
 0.901
PAB1214
gltB-2 glutamate synthase small chain.
  
 
 0.844
Your Current Organism:
Pyrococcus abyssi
NCBI taxonomy Id: 272844
Other names: P. abyssi GE5, Pyrococcus abyssi GE5, Pyrococcus abyssi str. GE5, Pyrococcus abyssi str. Orsay, Pyrococcus abyssi strain GE5
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