Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene co-occurrence
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PAB0359Ribosomal RNA small subunit methyltransferase C (rRNA (guanine-n2-)-methyltransferase) (16S rRNA M2G1207 methyltransferase). (195 aa)    
Predicted Functional Partners:
rps11P
rps11P SSU ribosomal protein S11P; Located on the platform of the 30S subunit. Belongs to the universal ribosomal protein uS11 family.
  
 
 0.987
rps13P
rps13P SSU ribosomal protein S13P/S18E; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement; Belongs to the universal ribosomal protein uS13 family.
  
 
 0.974
rpl18E
rpl18E LSU ribosomal protein L18E; Belongs to the eukaryotic ribosomal protein eL18 family.
  
 0.965
rpL34E
rpl34E LSU ribosomal protein L34E; Belongs to the eukaryotic ribosomal protein eL34 family.
 
 0.964
rpl40E
rpl40E LSU ribosomal protein L40E; Belongs to the eukaryotic ribosomal protein eL40 family.
  
 0.963
rpl14E
rpl14E LSU ribosomal protein L14E; Belongs to the eukaryotic ribosomal protein eL14 family.
 
 0.963
rpl13P
rpl13P LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.
  
 0.959
rps9P
rps9P SSU ribosomal protein S9P; Belongs to the universal ribosomal protein uS9 family.
 
 
 0.959
rps4P
rps4P SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.
  
 
 0.947
rpl24
rpl24P LSU ribosomal protein L24P; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.
  
 0.946
Your Current Organism:
Pyrococcus abyssi
NCBI taxonomy Id: 272844
Other names: P. abyssi GE5, Pyrococcus abyssi GE5, Pyrococcus abyssi str. GE5, Pyrococcus abyssi str. Orsay, Pyrococcus abyssi strain GE5
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