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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAB0378UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (418 aa)    
Predicted Functional Partners:
wlbD
wlbD UDP-N-acetylglucosamine 2-epimerase.
 
 0.998
aspB-like1
Pleiotropic regulatory protein degT; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.640
PAB2000
Hypothetical protein.
 
   
 0.580
PAB1288
GNPTA UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase (EC 2.7.8.15) (GTP) (G1PT) (N-acetylglucosamine-1-phosphate transferase) (GLCNAC-1-P transferase).
  
  
 0.575
rfbB
rfbB dTDP-glucose 4,6-dehydratase.
 
  
 0.562
galE-1
galE-1 UDP-glucose 4-epimerase).
  
 0.494
PAB0766
Polysaccharide biosynthesis related protein, substrate unknown.
 
  
 0.465
PAB1606
Putative glycosyltransferase, family 1.
 
  
 0.433
PAB1299
galE-2 UDP-glucose 4-epimerase.
 
  
 0.423
PAB1604
Putative glycosyltransferase, family 1.
 
  
 0.400
Your Current Organism:
Pyrococcus abyssi
NCBI taxonomy Id: 272844
Other names: P. abyssi GE5, Pyrococcus abyssi GE5, Pyrococcus abyssi str. GE5, Pyrococcus abyssi str. Orsay, Pyrococcus abyssi strain GE5
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