Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PAB0806NADH ubiquinone oxidoreductase chain 4 related (EC 1.6.5.3). (479 aa)    
Predicted Functional Partners:
PAB7306
Hypothetical protein.
  
 
 0.977
PAB0803
Multisubunit Na+/H+ antiporter, putative.
 
 
 0.960
PAB0805
Multisubunit Na+/H+ antiporter MnhB subunit, putative.
 
 
 0.960
PAB0802
Multisubunit Na+/H+ antiporter, putative.
  
 
 0.958
PAB0804
Multisubunit Na+/H+ antiporter MnhB subunit, putative.
  
 
 0.950
PAB3299
Multiple resistance and pH regulation protein F (mrpF / PhaF).
       0.881
PAB1391
NADH ubiquinone oxidoreductase.
 
 
0.849
PAB0488
Multisubunit Na+/H+ antiporter, putative.
 
 
 0.816
PAB1887
Hypothetical protein, potential integral membrane protein DUF67 family.
 
 
 0.766
PAB1893
NADH dehydrogenase subunit.
 
 
 0.760
Your Current Organism:
Pyrococcus abyssi
NCBI taxonomy Id: 272844
Other names: P. abyssi GE5, Pyrococcus abyssi GE5, Pyrococcus abyssi str. GE5, Pyrococcus abyssi str. Orsay, Pyrococcus abyssi strain GE5
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