Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PAB0899Hypothetical protein. (128 aa)    
Predicted Functional Partners:
PAB0900
Nucleotidyltransferase containing PAP/25A core domain, putative.
 
 
   0.935
PAB1764
Hypothetical protein.
  
     0.724
PAB0898
Nucleotidyltransferase, putative.
   
   0.611
PAB0897
Hypothetical protein.
       0.547
PAB0896
Acetyltransferase (GNAT) family protein.
 
     0.544
leuC-1
leuC-1 3-isopropylmalate dehydratase large subunit (isopropylmalate isomerase) (EC 4.2.1.33); Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.
       0.433
leuD-1
leuD-1 3-isopropylmalate dehydratase, small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 2 subfamily.
       0.433
leuA-3
leuA homolog alpha-isopropylmalate synthase related; Belongs to the alpha-IPM synthase/homocitrate synthase family.
       0.433
ilvD
ilvD dihydroxy-acid dehydratase (EC 4.2.1.9); Belongs to the IlvD/Edd family.
       0.433
leuB-1
leuB-1 3-isopropylmalate dehydrogenase.
       0.433
Your Current Organism:
Pyrococcus abyssi
NCBI taxonomy Id: 272844
Other names: P. abyssi GE5, Pyrococcus abyssi GE5, Pyrococcus abyssi str. GE5, Pyrococcus abyssi str. Orsay, Pyrococcus abyssi strain GE5
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