Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PAB1065Hypothetical protein, possibly GTP-binding. (186 aa)    
Predicted Functional Partners:
PAB1286
Hypothetical protein.
       0.870
PAB1287
Metal-dependent phosphohydrolase, putative.
       0.870
PAB0279
Protein tyrosine/serine/threonine phosphatase.
  
 0.668
PAB1288
GNPTA UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase (EC 2.7.8.15) (GTP) (G1PT) (N-acetylglucosamine-1-phosphate transferase) (GLCNAC-1-P transferase).
 
   
 0.653
pgk
Pgk 3-phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
  
 
 
 0.645
wtpA
ABC-type molybdate transport system protein, periplasmic component; Part of the ABC transporter complex WtpABC involved in molybdate/tungstate import. Binds tungstate and molybdate (By similarity).
       0.575
PAB1561
DNA helicase, putative.
   
 0.571
PAB1723
Hypothetical protein.
   
 0.571
PAB1999
Serine/threonine-specific protein phosphatase, putative.
   
 0.571
atpC
atpC archaeal/vacuolar-type H+-transporting ATP synthase, subunit C; Produces ATP from ADP in the presence of a proton gradient across the membrane.
  
 0.548
Your Current Organism:
Pyrococcus abyssi
NCBI taxonomy Id: 272844
Other names: P. abyssi GE5, Pyrococcus abyssi GE5, Pyrococcus abyssi str. GE5, Pyrococcus abyssi str. Orsay, Pyrococcus abyssi strain GE5
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