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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAB1349Beta galactosidase, putative (EC 3.2.1.23). (787 aa)    
Predicted Functional Partners:
bgal
bgaL-2 beta-galactosidase (EC 3.2.1.23) (lactase); Belongs to the glycosyl hydrolase 1 family.
 
 
 0.967
PAB1740
bgaL-1 beta-galactosidase (EC 3.2.1.23) (lactase); Belongs to the glycosyl hydrolase 1 family.
 
 
 0.943
PAB1348
glmS-like glutamine-fructose-6-phosphate transaminase related protein.
     
 0.903
dppB
dppB-3 dipeptide ABC transporter, permease component.
 
     0.825
PAB1345
dppC-3 ABC transporter, permease component.
 
     0.819
dppD
dppD-3 dipeptide ABC transporter, ATP-binding protein.
       0.793
dppF
dppF-3 dipeptide ABC transporter, ATP-binding protein.
       0.793
PAB1341
Hypothetical protein.
     
 0.731
PAB1343
dppA-3 dipeptide transport protein precursor (dipeptide-binding protein).
 
     0.724
malG
malG maltose transport system permease protein.
 
  
 0.545
Your Current Organism:
Pyrococcus abyssi
NCBI taxonomy Id: 272844
Other names: P. abyssi GE5, Pyrococcus abyssi GE5, Pyrococcus abyssi str. GE5, Pyrococcus abyssi str. Orsay, Pyrococcus abyssi strain GE5
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