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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAB1382flaD/E flagella-related protein D or E. (419 aa)    
Predicted Functional Partners:
PAB1381
flaC flagella-related protein C.
  
  
 0.984
PAB1387
flaJ flagella-related protein J.
 
  
 0.977
flaB4
flaB1-2 flagellin B4 precursor; Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella.
 
  
 0.966
PAB1384
flaG flagella-related protein G.
  
    0.966
flaB5
flaB1-1 flagellin B5 precursor; Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella.
 
  
 0.964
PAB1385
flaH flagella-related protein H.
 
  
 0.964
PAB1386
flaI flagella-related protein I.
 
  
 0.964
PAB1383
flaF flagella-related protein F.
  
  
 0.910
PAB1378
flaB1-3 flagellin B2 precursor, putative; Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella.
 
  
 0.890
PAB1388
Hypothetical protein.
       0.814
Your Current Organism:
Pyrococcus abyssi
NCBI taxonomy Id: 272844
Other names: P. abyssi GE5, Pyrococcus abyssi GE5, Pyrococcus abyssi str. GE5, Pyrococcus abyssi str. Orsay, Pyrococcus abyssi strain GE5
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