Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PAB1391NADH ubiquinone oxidoreductase. (486 aa)    
Predicted Functional Partners:
nuoD
nuoD NADH dehydrognease I, subunit D; Belongs to the complex I 49 kDa subunit family.
 
 
 0.993
nuoB
nuoB NADH dehydrogenase I, subunit B; Belongs to the complex I 20 kDa subunit family.
 
 
 0.992
PAB1395
Formate hydrogen lyase subunit 6 (hydrogenase 3 component F).
  
 
 0.991
nuoC
nuoC NADH dehydrogenase I, subunit C, putative.
  
 
 0.988
PAB1392
Hydrogenase 4, component B or formate hydrogen lyase, subunit 3.
 
 
0.977
PAB1393
Hydrogenase 4, component C or formate hydrogen lyase, subunit 4.
 
   
 0.971
nuoI
nuoI NADH dehydrogenase I, subunit I.
  
 
 0.969
PAB1402
Hydrogenase 4, component F or formate hydrogen lyase, subunit 3.
 
 
0.958
PAB1894
cooX-like CO-induced hydrogenase related, subunit X.
  
 
 0.957
PAB1400
Putative integral membrane protein, DUF67 family.
  
 
 0.956
Your Current Organism:
Pyrococcus abyssi
NCBI taxonomy Id: 272844
Other names: P. abyssi GE5, Pyrococcus abyssi GE5, Pyrococcus abyssi str. GE5, Pyrococcus abyssi str. Orsay, Pyrococcus abyssi strain GE5
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.