STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vorBvorB ketoisovalerate oxidoreductase subunit vorB (EC 1.-.-.-). (311 aa)    
Predicted Functional Partners:
porG
porG pyruvate/ketoisovalerate oxidoreductases common gamma subunit.
 
 0.999
vorD
vorD ketoisovalerate oxidoreductase subunit vorD (EC 1.-.-.-).
 
 0.999
vorA
vorA ketoisovalerate oxidoreductase subunit vorA (EC 1.-.-.-).
 0.999
porA
porA pyruvate synthase subunit porA (EC 1.2.7.1) (pyruvate oxidoreductase alpha chain) (pyruvate ferredoxin oxidoreductase).
 
 0.998
porD
porD pyruvate synthase subunit porD (EC 1.2.7.1) (pyruvate oxidoreductase delta chain) (pyruvate ferredoxin oxidoreductase).
 
 
 0.980
porB
porB pyruvate synthase subunit porB (EC 1.2.7.1) (pyruvate oxidoreductase beta chain) (pyruvate ferredoxin oxidoreductase).
 
   
0.814
PAB2084
Electron transport protein, containing 4Fe-4S binding domain.
  
  
 0.793
korA-2
korA-2 2-ketoglutarate ferredoxin oxidoreductase, subunit alpha.
  
 
 0.755
korA-1
korA-1 2-ketoglutarate ferredoxin oxidoreductase, subunit alpha.
  
 
 0.755
iorB-2
iorB-like indolepyruvate ferredoxin oxidoreductase related protein.
  
 
 0.728
Your Current Organism:
Pyrococcus abyssi
NCBI taxonomy Id: 272844
Other names: P. abyssi GE5, Pyrococcus abyssi GE5, Pyrococcus abyssi str. GE5, Pyrococcus abyssi str. Orsay, Pyrococcus abyssi strain GE5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.