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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAB1908Conserved hypothetical protein; Belongs to the UPF0179 family. (142 aa)    
Predicted Functional Partners:
egsA
Glycerol 1-phosphate dehydrogenase; Catalyzes the NAD(P)H-dependent reduction of dihydroxyacetonephosphate (DHAP or glycerone phosphate) to glycerol 1- phosphate (G1P). The G1P thus generated is used as the glycerophosphate backbone of phospholipids in the cellular membranes of Archaea. Belongs to the glycerol-1-phosphate dehydrogenase family.
 
   
 0.886
PAB0732
rpoF DNA-directed RNA polymerase, subunit F.
 
     0.667
PAB0082
Queuine tRNA-ribosyltransferase.
  
     0.655
PAB0188
Predicted membrane protein.
 
   
 0.654
PAB0194
Predicted Fe-S oxidoreductase.
  
     0.648
PAB1699
Hypothetical protein, containing metalloenzyme DUF136 domain.
  
     0.599
PAB2141
Membrane protein, putative.
  
     0.599
PAB2104
Hypothetical protein, containing helix-turn-helix motif.
  
     0.574
PAB0475
Predicted transcriptional regulator.
 
     0.562
PAB1045
Hypothetical protein.
  
     0.549
Your Current Organism:
Pyrococcus abyssi
NCBI taxonomy Id: 272844
Other names: P. abyssi GE5, Pyrococcus abyssi GE5, Pyrococcus abyssi str. GE5, Pyrococcus abyssi str. Orsay, Pyrococcus abyssi strain GE5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.