Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PAB0376 | PAB1916 | PAB0376 | PAB1916 | Lipoate-protein ligase A. | lplA-like lipoate-protein ligase A related. | 0.981 |
PAB0376 | gcsH4 | PAB0376 | PAB0559 | Lipoate-protein ligase A. | gcvH glycine cleavage system protein H; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.862 |
PAB0376 | prsA | PAB0376 | PAB1114 | Lipoate-protein ligase A. | Phosphoribosylpyrophosphate synthetase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P). | 0.637 |
PAB1579 | PAB1916 | PAB1579 | PAB1916 | Radical SAM family protein. | lplA-like lipoate-protein ligase A related. | 0.620 |
PAB1579 | bioB-like | PAB1579 | PAB2355 | Radical SAM family protein. | Biotin synthase related protein. | 0.863 |
PAB1579 | gcsH4 | PAB1579 | PAB0559 | Radical SAM family protein. | gcvH glycine cleavage system protein H; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.472 |
PAB1916 | PAB0376 | PAB1916 | PAB0376 | lplA-like lipoate-protein ligase A related. | Lipoate-protein ligase A. | 0.981 |
PAB1916 | PAB1579 | PAB1916 | PAB1579 | lplA-like lipoate-protein ligase A related. | Radical SAM family protein. | 0.620 |
PAB1916 | PAB1917 | PAB1916 | PAB1917 | lplA-like lipoate-protein ligase A related. | Hypothetical protein. | 0.462 |
PAB1916 | bioB-like | PAB1916 | PAB2355 | lplA-like lipoate-protein ligase A related. | Biotin synthase related protein. | 0.439 |
PAB1916 | gcsH4 | PAB1916 | PAB0559 | lplA-like lipoate-protein ligase A related. | gcvH glycine cleavage system protein H; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.906 |
PAB1916 | prsA | PAB1916 | PAB1114 | lplA-like lipoate-protein ligase A related. | Phosphoribosylpyrophosphate synthetase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P). | 0.637 |
PAB1916 | tuf | PAB1916 | PAB0465 | lplA-like lipoate-protein ligase A related. | Tuf translation elongation factor EF-1, subunit alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily. | 0.443 |
PAB1917 | PAB1916 | PAB1917 | PAB1916 | Hypothetical protein. | lplA-like lipoate-protein ligase A related. | 0.462 |
bioB-like | PAB1579 | PAB2355 | PAB1579 | Biotin synthase related protein. | Radical SAM family protein. | 0.863 |
bioB-like | PAB1916 | PAB2355 | PAB1916 | Biotin synthase related protein. | lplA-like lipoate-protein ligase A related. | 0.439 |
bioB-like | gcsH4 | PAB2355 | PAB0559 | Biotin synthase related protein. | gcvH glycine cleavage system protein H; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.448 |
gcsH4 | PAB0376 | PAB0559 | PAB0376 | gcvH glycine cleavage system protein H; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | Lipoate-protein ligase A. | 0.862 |
gcsH4 | PAB1579 | PAB0559 | PAB1579 | gcvH glycine cleavage system protein H; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | Radical SAM family protein. | 0.472 |
gcsH4 | PAB1916 | PAB0559 | PAB1916 | gcvH glycine cleavage system protein H; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | lplA-like lipoate-protein ligase A related. | 0.906 |
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