Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
crcBChromosome condensation protein, crcB homolog; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family. (123 aa)    
Predicted Functional Partners:
PAB1926
Hypothetical protein; Belongs to the UPF0166 family.
 
   
 0.952
queC
Hypothetical protein; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)).
      
 0.930
dfp
Dfp DNA/pantothenate metabolism flavoprotein.
 
     0.752
PAB0502
Hypothetical protein.
     
 0.734
PAB0503
Hypothetical protein.
       0.717
PAB0504
Hypothetical protein.
       0.717
PAB1922
Hypothetical protein, possibly a transcriptional regulator.
 
     0.698
PAB1992
Predicted ATPase of the PP-loop superfamily.
  
   
 0.670
PAB2114
Metallopeptidase-2.
       0.662
PAB1924
ABC type transporter permease component, substrate unknown.
       0.660
Your Current Organism:
Pyrococcus abyssi
NCBI taxonomy Id: 272844
Other names: P. abyssi GE5, Pyrococcus abyssi GE5, Pyrococcus abyssi str. GE5, Pyrococcus abyssi str. Orsay, Pyrococcus abyssi strain GE5
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