Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
PAB1971Glycosyltransferase. (287 aa)    
Predicted Functional Partners:
PAB1972
Hypothetical protein.
     
 0.935
PAB1288
GNPTA UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase (EC 2.7.8.15) (GTP) (G1PT) (N-acetylglucosamine-1-phosphate transferase) (GLCNAC-1-P transferase).
  
  
 0.742
PAB1973
Hypothetical protein.
       0.643
htpX-2
Heat shock protein/ Zn-dependent protease with chaperone function, M48 family.
       0.642
prf1
Prf1 peptide chain release factor subunit 1 (translation termination factor ARF1); Directs the termination of nascent peptide synthesis (translation) in response to the termination codons UAA, UAG and UGA.
       0.563
PAB2312
Transcriptional regulatory protein Lrp-Asn family.
       0.552
PAB1975
dCMP deaminase, putative.
  
    0.549
aspB-like1
Pleiotropic regulatory protein degT; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.438
PAB0973
Putative hexosyltransferase, glycosyltransferase family 1.
 
  
 0.437
PAB0827
Hexosyltransferase, N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein homolog.
 
  
 0.428
Your Current Organism:
Pyrococcus abyssi
NCBI taxonomy Id: 272844
Other names: P. abyssi GE5, Pyrococcus abyssi GE5, Pyrococcus abyssi str. GE5, Pyrococcus abyssi str. Orsay, Pyrococcus abyssi strain GE5
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