Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
rpl32erpl32E LSU ribosomal protein L32E; Belongs to the eukaryotic ribosomal protein eL32 family. (130 aa)    
Predicted Functional Partners:
rps15P
rps15P SSU ribosomal protein S15P.
  
 
 0.999
rps11P
rps11P SSU ribosomal protein S11P; Located on the platform of the 30S subunit. Belongs to the universal ribosomal protein uS11 family.
 
 
 0.999
rpl18E
rpl18E LSU ribosomal protein L18E; Belongs to the eukaryotic ribosomal protein eL18 family.
 
 0.999
rpl13P
rpl13P LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.
  
 0.999
rps9P
rps9P SSU ribosomal protein S9P; Belongs to the universal ribosomal protein uS9 family.
 
 0.999
rpl7AE
rpl7AE LSU ribosomal protein L7AE; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs.
  
 0.999
rpl15E
rpl15E LSU ribosomal protein L15E; Belongs to the eukaryotic ribosomal protein eL15 family.
  
 0.999
rpl21E
rpl21E LSU ribosomal protein L21E; Belongs to the eukaryotic ribosomal protein eL21 family.
   
 0.999
rpl44e
rpl44E LSU ribosomal protein L44E; Binds to the 23S rRNA.
  
 0.999
rps6e
rps6E SSU ribosomal protein S6E; Belongs to the eukaryotic ribosomal protein eS6 family.
  
 
 0.999
Your Current Organism:
Pyrococcus abyssi
NCBI taxonomy Id: 272844
Other names: P. abyssi GE5, Pyrococcus abyssi GE5, Pyrococcus abyssi str. GE5, Pyrococcus abyssi str. Orsay, Pyrococcus abyssi strain GE5
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