Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PAB2176Hypothetical 2-acetyl-1-alkylglycerophosphocholine esterase. (286 aa)    
Predicted Functional Partners:
PAB2175
Hypothetical sugar symporter.
 
     0.956
PAB2174
Hypothetical sugar symporter.
 
     0.946
PAB0180
Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46).
 
   
 0.890
PAB2177
Short-chain alcohol dehydrogenase, putative glucose-1-dehydrogenase.
 
  
 0.720
PAB2178
pepQ-1 X-pro dipeptidase.
 
     0.616
PAB1163
Hypothetical protein.
  
    0.607
lon
Lon intein containing ATP-dependent protease La homolog; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Degrades polypeptides processively (By similarity); Belongs to the peptidase S16 family. Archaeal LonB subfamily.
    
 0.588
glpk
glpK glycerol kinase (EC 2.7.1.30); Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.
       0.585
PAB1655
paaI related protein, phenylacetic acid degradation-related protein.
    
 0.563
PAB0182
Hypothetical protein.
       0.454
Your Current Organism:
Pyrococcus abyssi
NCBI taxonomy Id: 272844
Other names: P. abyssi GE5, Pyrococcus abyssi GE5, Pyrococcus abyssi str. GE5, Pyrococcus abyssi str. Orsay, Pyrococcus abyssi strain GE5
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