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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAB3177Multiple resistance and pH regulation protein F (mrpF / phaF). (88 aa)    
Predicted Functional Partners:
PAB1885
Na+/H+ antiporter subunit, phaG_mnhG_yufB family.
 
 
 0.999
PAB1887
Hypothetical protein, potential integral membrane protein DUF67 family.
  
 
 0.998
PAB1886
Conserved hypothetical protein (C-terminal fragment).
 
 
 0.997
PAB1884
Hypothetical protein, potential transmembrane protein DUF68 family.
 
 
 0.987
PAB1888
NADH ubiquinone oxidoreductase subunit.
  
 
 0.945
PABs11300
Conserved hypothetical protein (N-terminal fragment).
 
 
 0.935
PAB1889
Hypothetical protein.
   
   0.889
PAB1890
NADH ubiquinone oxidoreductase subunit.
   
   0.889
PAB1891
NADH dehydrogenase, 30 kD subunit.
   
   0.889
PAB1892
cooH-like CO-induced hydrogenase.
   
   0.889
Your Current Organism:
Pyrococcus abyssi
NCBI taxonomy Id: 272844
Other names: P. abyssi GE5, Pyrococcus abyssi GE5, Pyrococcus abyssi str. GE5, Pyrococcus abyssi str. Orsay, Pyrococcus abyssi strain GE5
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