Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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[Homology]
Score
PAB3299Multiple resistance and pH regulation protein F (mrpF / PhaF). (89 aa)    
Predicted Functional Partners:
PAB0802
Multisubunit Na+/H+ antiporter, putative.
 
     0.950
PAB0805
Multisubunit Na+/H+ antiporter MnhB subunit, putative.
 
     0.949
PAB0803
Multisubunit Na+/H+ antiporter, putative.
 
     0.943
PAB0804
Multisubunit Na+/H+ antiporter MnhB subunit, putative.
       0.933
PAB0806
NADH ubiquinone oxidoreductase chain 4 related (EC 1.6.5.3).
       0.881
PAB7306
Hypothetical protein.
       0.881
cobB
NAD-dependent protein deacetylase; NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form. Deacetylates the N-terminal lysine residue of Alba, the major archaeal chromatin protein and that, in turn, increases Alba's DNA binding affinity, thereby repressing transcription. Belongs to the sirtuin family. Class III subfamily.
       0.773
PAB0800
ATP-binding protein, putative; Belongs to the archaeal ATPase family.
       0.693
for
For formaldehyde:ferredoxin oxidoreductase.
       0.595
PAB2357
Component of the U3 small nucleolar ribonucleoprotein, imp4 homolog; Probably involved in the biogenesis of the ribosome.
       0.579
Your Current Organism:
Pyrococcus abyssi
NCBI taxonomy Id: 272844
Other names: P. abyssi GE5, Pyrococcus abyssi GE5, Pyrococcus abyssi str. GE5, Pyrococcus abyssi str. Orsay, Pyrococcus abyssi strain GE5
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