STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NCAS0A03230SRP40_C domain-containing protein. (402 aa)    
Predicted Functional Partners:
NCAS0A14170
Nop domain-containing protein.
   
 
 0.961
NCAS0C04900
PUA domain-containing protein.
   
 
 0.938
NCAS0I01890
Uncharacterized protein.
   
 
 0.931
NCAS0B00870
Nop domain-containing protein.
   
 
 0.927
NCAS0A06630
Uncharacterized protein.
   
 
 0.851
NCAS0G03030
SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
   
   0.820
NCAS0I00750
CP-type G domain-containing protein.
   
 
 0.783
NCAS0C04240
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.778
NCAS0F02280
Uncharacterized protein.
   
    0.772
NCAS0I01370
CBF domain-containing protein.
   
   0.761
Your Current Organism:
Naumovozyma castellii
NCBI taxonomy Id: 1064592
Other names: N. castellii CBS 4309, Naumovozyma castellii CBS 4309
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