STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kpsE1Capsule polysaccharide export inner-membrane protein KpsE-1. (409 aa)    
Predicted Functional Partners:
ADE83933.1
ABC polysaccharide export transporter, inner membrane subunit.
 
 
 0.997
kpsT1
Capsule polysaccharide export ATP-binding protein KpsT-1.
 
 0.997
kpsT2
Capsule polysaccharide export ATP-binding protein KpsT-2.
 
 0.987
ADE86803.1
Capsule polysaccharide biosynthesis protein family.
 
  
 0.946
kpsE2
Capsule polysaccharide export inner-membrane protein KpsE-2.
 
  
 
0.927
ADE86950.1
Polysaccharide biosynthesis/export protein family.
 
  
 0.896
ADE86802.1
Polysaccharide biosynthesis/export protein family.
 
  
 0.836
ADE86801.1
Capsule polysaccharide modification protein family.
 
 
 
 0.822
ADE83893.1
ABC transporter, permease protein.
 
  
 0.737
ADE83936.1
Conserved hypothetical protein.
 
     0.697
Your Current Organism:
Rhodobacter capsulatus
NCBI taxonomy Id: 272942
Other names: R. capsulatus SB 1003, Rhodobacter capsulatus SB 1003
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