STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADE83950.1Conserved hypothetical protein. (915 aa)    
Predicted Functional Partners:
ADE83949.1
Outer membrane efflux protein.
 
  
 0.964
ADE83948.1
ABC transporter, ATP-binding/permease protein.
 
  
 0.957
ADE83947.1
Type I secretion membrane fusion protein, HlyD family.
 
  
 0.941
ADE84213.1
Sporulation domain protein.
 
     0.646
ADE84873.1
Lipoprotein, putative.
  
     0.615
ftsK
Cell division protein FtsK.
   
 
 0.606
hup3
DNA-binding protein HU-3.
  
   
 0.597
ADE86715.1
Conserved hypothetical protein.
  
     0.579
ADE86880.1
Conserved hypothetical protein.
  
     0.579
ADE85328.1
Conserved hypothetical protein.
  
    0.562
Your Current Organism:
Rhodobacter capsulatus
NCBI taxonomy Id: 272942
Other names: R. capsulatus SB 1003, Rhodobacter capsulatus SB 1003
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.