STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADE84240.1acyl-CoA dehydrogenase domain protein. (591 aa)    
Predicted Functional Partners:
fadB
Fatty acid oxidation complex, alpha subunit.
 
 0.957
fadJ
Fatty acid oxidation complex, alpha subunit.
 
 0.935
etfA
Electron transfer flavoprotein, alpha subunit.
 
 0.854
etfB
Electron transfer flavoprotein, beta subunit.
 
 
 0.833
paaG
enoyl-CoA hydratase; Could possibly oxidize fatty acids using specific components.
 
 0.793
etfD
Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone.
 
 
 0.775
ADE84625.1
enoyl-CoA hydratase/isomerase family protein.
  
 0.752
paaF
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.752
atoB1
acetyl-CoA acetyltransferase-1; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.722
ADE84239.1
Transcriptional regulator, MerR family.
  
    0.721
Your Current Organism:
Rhodobacter capsulatus
NCBI taxonomy Id: 272942
Other names: R. capsulatus SB 1003, Rhodobacter capsulatus SB 1003
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