STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fadBFatty acid oxidation complex, alpha subunit. (728 aa)    
Predicted Functional Partners:
fadA
Fatty acid oxidation complex, beta subunit; Belongs to the thiolase-like superfamily. Thiolase family.
 0.999
atoB1
acetyl-CoA acetyltransferase-1; Belongs to the thiolase-like superfamily. Thiolase family.
 0.999
atoB2
acetyl-CoA acetyltransferase-2; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.999
atoB3
acetyl-CoA acetyltransferase-3; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.999
ivdH
isovaleryl-CoA dehydrogenase.
 
 0.987
gcdH
glutaryl-CoA dehydrogenase.
 
 0.985
scoB
succinyl-CoA:3-ketoacid-CoA transferase, subunit B.
  
 0.975
fadJ
Fatty acid oxidation complex, alpha subunit.
 
 0.972
scoA
succinyl-CoA:3-ketoacid-CoA transferase, subunit A.
  
 
 0.971
mccB
methylcrotonoyl-CoA carboxylase, beta subunit.
  
 
 0.964
Your Current Organism:
Rhodobacter capsulatus
NCBI taxonomy Id: 272942
Other names: R. capsulatus SB 1003, Rhodobacter capsulatus SB 1003
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.