STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADE84767.1ParB domain protein nuclease. (283 aa)    
Predicted Functional Partners:
ADE84765.1
Integrase, catalytic region.
 
     0.949
ADE84766.1
Conserved hypothetical protein.
 
     0.944
ADE84764.1
Bacteriophage DNA transposition B protein.
 
     0.918
ADE84756.1
Protein of unknown function DUF1018.
 
     0.803
ADE84773.1
DNA binding protein.
       0.791
ADE84768.1
Hypothetical protein.
       0.773
ADE84769.1
Conserved hypothetical protein.
       0.773
ADE84770.1
Membrane protein, putative.
       0.773
ADE84771.1
Lipoprotein, putative.
       0.773
ADE84772.1
Hypothetical protein.
       0.773
Your Current Organism:
Rhodobacter capsulatus
NCBI taxonomy Id: 272942
Other names: R. capsulatus SB 1003, Rhodobacter capsulatus SB 1003
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.